G Session information
G.1 Important packages
Details of the main packages used to build this thesis.
- bookdown (v0.7) – writing complex documents using R Markdown [247,248]
- clustree (v0.3.0) – producing clustering tree visualisations [208,249]
- cowplot (v0.9.3) – constructing complex panel figures [232]
- dplyr (v0.7.8) – manipulation of data frames [237]
- forcats (v0.3.0) – manipulation of factors [250]
- ggplot2 (v3.1.0) – data visualisation [231,251]
- glue (v1.3.0) – complex joining of strings [252]
- googleAnalyticsR (v0.6.0) – downloading Google Analytics data [253]
- googleAuthR (v0.7.0) – Google API authentication [254]
- here (v0.1) – locating files [255]
- jsonlite (v1.6) – reading JSON files [256,257]
- knitr (v1.20) – generating dynamic reports using R [242–244]
- lubridate (v1.7.4) – manipulation of dates [258,259]
- magrittr (v1.5) – piping between functions [260]
- packrat (v0.4.9.3) – management of package dependencies [261]
- purrr (v0.2.5) – functional programming for lists [239]
- RColorBrewer (v1.1.2) – ColorBrewer colour palettes [262]
- readr (v1.3.1) – input of data files [263]
- remotes (v2.0.0) – installation of packages from GitHub [264]
- rmarkdown (v1.10) – dynamic documents for R [246]
- stringr (v1.3.1) – manipulation of strings [265]
- tidyr (v0.8.2) – tidying of data [238]
- viridis (v0.5.1) – viridis colour palettes [266]
G.2 Full session information
Session info ------------------------------------------------------------- setting value
version R version 3.6.1 (2017-01-27)
system x86_64, linux-gnu
ui X11
language en_US.UTF-8
collate en_US.UTF-8
tz UTC
date 2019-08-12 Packages ----------------------------------------------------------------- package * version date source
assertthat 0.2.0 2017-04-11 CRAN (R 3.6.1)
backports 1.1.2 2017-12-13 CRAN (R 3.6.1)
base * 3.6.1 2019-07-22 local
bindr 0.1.1 2018-03-13 CRAN (R 3.6.1)
bindrcpp * 0.2.2 2018-03-29 CRAN (R 3.6.1)
bookdown 0.7 2018-02-18 CRAN (R 3.6.1)
checkmate 1.9.1 2019-01-15 CRAN (R 3.6.1)
clustree * 0.3.0 2019-02-24 CRAN (R 3.6.1)
colorspace 1.3-2 2016-12-14 CRAN (R 3.6.1)
compiler 3.6.1 2019-07-22 local
cowplot * 0.9.3 2018-07-15 CRAN (R 3.6.1)
crayon 1.3.4 2017-09-16 CRAN (R 3.6.1)
datasets * 3.6.1 2019-07-22 local
devtools 1.13.6 2018-06-27 CRAN (R 3.6.1)
digest 0.6.18 2018-10-10 CRAN (R 3.6.1)
dplyr * 0.7.8 2018-11-10 CRAN (R 3.6.1)
evaluate 0.12 2018-10-09 CRAN (R 3.6.1)
farver 1.1.0 2018-11-20 CRAN (R 3.6.1)
forcats 0.3.0 2018-02-19 CRAN (R 3.6.1)
ggforce 0.2.2 2019-04-23 CRAN (R 3.6.1)
ggplot2 * 3.1.0 2018-10-25 CRAN (R 3.6.1)
ggraph * 1.0.2 2018-07-07 CRAN (R 3.6.1)
ggrepel 0.8.0 2018-05-09 CRAN (R 3.6.1)
glue 1.3.0 2018-07-17 CRAN (R 3.6.1)
graphics * 3.6.1 2019-07-22 local
grDevices * 3.6.1 2019-07-22 local
grid 3.6.1 2019-07-22 local
gridExtra 2.3 2017-09-09 CRAN (R 3.6.1)
gtable 0.2.0 2016-02-26 CRAN (R 3.6.1)
here * 0.1 2017-05-28 CRAN (R 3.6.1)
highr 0.7 2018-06-09 CRAN (R 3.6.1)
hms 0.4.2 2018-03-10 CRAN (R 3.6.1)
htmltools 0.3.6 2017-04-28 CRAN (R 3.6.1)
igraph 1.2.2 2018-07-27 CRAN (R 3.6.1)
jsonlite * 1.6 2018-12-07 CRAN (R 3.6.1)
knitr * 1.20 2018-02-20 CRAN (R 3.6.1)
labeling 0.3 2014-08-23 CRAN (R 3.6.1)
lazyeval 0.2.1 2017-10-29 CRAN (R 3.6.1)
magrittr 1.5 2014-11-22 CRAN (R 3.6.1)
maps * 3.3.0 2018-04-03 CRAN (R 3.6.1)
MASS 7.3-51.4 2019-03-31 CRAN (R 3.6.1)
memoise 1.1.0 2017-04-21 CRAN (R 3.6.1)
methods * 3.6.1 2019-07-22 local
munsell 0.5.0 2018-06-12 CRAN (R 3.6.1)
packrat 0.4.9-3 2018-06-01 CRAN (R 3.6.1)
pillar 1.3.0 2018-07-14 CRAN (R 3.6.1)
pkgconfig 2.0.2 2018-08-16 CRAN (R 3.6.1)
plyr 1.8.4 2016-06-08 CRAN (R 3.6.1)
polyclip 1.9-1 2018-07-27 CRAN (R 3.6.1)
purrr 0.2.5 2018-05-29 CRAN (R 3.6.1)
R6 2.3.0 2018-10-04 CRAN (R 3.6.1)
RColorBrewer * 1.1-2 2014-12-07 CRAN (R 3.6.1)
Rcpp 1.0.0 2018-11-07 CRAN (R 3.6.1)
readr * 1.3.1 2018-12-21 CRAN (R 3.6.1)
rlang 0.3.0.1 2018-10-25 CRAN (R 3.6.1)
rmarkdown 1.10 2018-06-11 CRAN (R 3.6.1)
rprojroot 1.3-2 2018-01-03 CRAN (R 3.6.1)
rstudioapi 0.8 2018-10-02 CRAN (R 3.6.1)
scales 1.0.0 2018-08-09 CRAN (R 3.6.1)
stats * 3.6.1 2019-07-22 local
stringi 1.2.4 2018-07-20 CRAN (R 3.6.1)
stringr * 1.3.1 2018-05-10 CRAN (R 3.6.1)
tibble 1.4.2 2018-01-22 CRAN (R 3.6.1)
tidygraph 1.1.1 2018-11-20 CRAN (R 3.6.1)
tidyr * 0.8.2 2018-10-28 CRAN (R 3.6.1)
tidyselect 0.2.5 2018-10-11 CRAN (R 3.6.1)
tools 3.6.1 2019-07-22 local
tweenr 1.0.1 2018-12-14 CRAN (R 3.6.1)
unimelbdown 0.0.0.9002 2019-07-31 Github (lazappi/unimelbdown@911d047)
utils * 3.6.1 2019-07-22 local
viridis 0.5.1 2018-03-29 CRAN (R 3.6.1)
viridisLite 0.3.0 2018-02-01 CRAN (R 3.6.1)
withr 2.1.2 2018-03-15 CRAN (R 3.6.1)
xfun 0.3 2018-07-06 CRAN (R 3.6.1)
yaml 2.2.0 2018-07-25 CRAN (R 3.6.1)