C Simulation comparison
C.1 Timings
C.2 Package versions
Versions of simulation packages used for the comparison.
| Package | Version |
|---|---|
| BASiCS | 1.4.1 |
| DESeq2 | 1.22.2 |
| edgeR | 3.22.3 |
| ggplot2 | 3.0.0 |
| limma | 3.36.2 |
| mfa | 1.4.1 |
| phenopath | 1.6.0 |
| scater | 1.10.1 |
| scDD | 1.6.1 |
| scran | 1.10.2 |
| SingleCellExperiment | 1.4.1 |
| SparseDC | 0.1.17 |
| splatter | 1.6.1 |
| zinbwave | 1.4.1 |